Zahedan Journal of Research in Medical Sciences

Published by: Kowsar

Genotyping of Hepatitis B Virus by Multiplex PCR in Sistan and Baluchestan Province

Kajal Yoosefi 1 , Mohsen Taheri 2 , Soheila Khosravi 3 , Esmaeel Saneie-Moghadam 3 and Amir Hossein Mohagheghi-Fard 1 , *
Authors Information
1 Department of Microbiology, Faculty of Medicine, Zahedan University of Medical Sciences, Zahedan, IR Iran
2 Department of Genetic, Faculty of Medicine, Zahedan University of Medical Sciences, Zahedan, IR Iran
3 General Physician, Zahedan Blood Transfusion Centre, Zahedan, IR Iran
Article information
  • Zahedan Journal of Research in Medical Sciences: February 2016, 18 (2); e5986
  • Published Online: February 28, 2016
  • Article Type: Research Article
  • Received: January 30, 2015
  • Accepted: May 3, 2015
  • DOI: 10.17795/zjrms-5986

To Cite: Yoosefi K, Taheri M, Khosravi S, Saneie-Moghadam E, Mohagheghi-Fard A H. Genotyping of Hepatitis B Virus by Multiplex PCR in Sistan and Baluchestan Province, Zahedan J Res Med Sci. 2016 ; 18(2):e5986. doi: 10.17795/zjrms-5986.

Abstract
Copyright © 2016, Zahedan University of Medical Sciences. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/) which permits copy and redistribute the material just in noncommercial usages, provided the original work is properly cited.
1. Background
2. Objectives
3. Patients and Methods
4. Results
5. Discussion
Acknowledgements
Footnotes
References
  • 1. Wang S, Huang D, Sun S, Ma W, Zhen Q. Interleukin-10 promoter polymorphism predicts initial response of chronic hepatitis B to interferon alfa. Virol J. 2011; 8: 28[DOI][PubMed]
  • 2. World Health Organization . Hepatitis B.
  • 3. Knipe DM, Howley P. Fields virology. 2001; : 2971-3036
  • 4. Fung SK, Lok AS. Hepatitis B virus genotypes: do they play a role in the outcome of HBV infection? Hepatology. 2004; 40(4): 790-2[DOI][PubMed]
  • 5. Cao GW. Clinical relevance and public health significance of hepatitis B virus genomic variations. World J Gastroenterol. 2009; 15(46): 5761-9[PubMed]
  • 6. Tran TT, Trinh TN, Abe K. New complex recombinant genotype of hepatitis B virus identified in Vietnam. J Virol. 2008; 82(11): 5657-63[DOI][PubMed]
  • 7. Olinger CM, Jutavijittum P, Hubschen JM, Yousukh A, Samountry B, Thammavong T, et al. Possible new hepatitis B virus genotype, southeast Asia. Emerg Infect Dis. 2008; 14(11): 1777-80[DOI][PubMed]
  • 8. Tatematsu K, Tanaka Y, Kurbanov F, Sugauchi F, Mano S, Maeshiro T, et al. A genetic variant of hepatitis B virus divergent from known human and ape genotypes isolated from a Japanese patient and provisionally assigned to new genotype J. J Virol. 2009; 83(20): 10538-47[DOI][PubMed]
  • 9. Kirschberg O, Schuttler C, Repp R, Schaefer S. A multiplex-PCR to identify hepatitis B virus--enotypes A-F. J Clin Virol. 2004; 29(1): 39-43[PubMed]
  • 10. Kato H, Orito E, Gish RG, Bzowej N, Newsom M, Sugauchi F, et al. Hepatitis B e antigen in sera from individuals infected with hepatitis B virus of genotype G. Hepatology. 2002; 35(4): 922-9[DOI][PubMed]
  • 11. Kato H, Orito E, Gish RG, Sugauchi F, Suzuki S, Ueda R, et al. Characteristics of hepatitis B virus isolates of genotype G and their phylogenetic differences from the other six genotypes (A through F). J Virol. 2002; 76(12): 6131-7[PubMed]
  • 12. Aghakhani A, Hamkar R, Zamani N, Eslamifar A, Banifazl M, Saadat A, et al. Hepatitis B virus genotype in Iranian patients with hepatocellular carcinoma. Int J Infect Dis. 2009; 13(6): 685-9[DOI][PubMed]
  • 13. Chandra PK, Biswas A, Datta S, Banerjee A, Panigrahi R, Chakrabarti S, et al. Subgenotypes of hepatitis B virus genotype D (D1, D2, D3 and D5) in India: differential pattern of mutations, liver injury and occult HBV infection. J Viral Hepat. 2009; 16(10): 749-56[DOI][PubMed]
  • 14. Baig S, Siddiqui A, Chakravarty R, Moatter T. Hepatitis B virus subgenotypes D1 and D3 are prevalent in Pakistan. BMC Res Notes. 2009; 2: 1[DOI][PubMed]
  • 15. Salem F, Aghasadeghi MR, Javadi F, Roohvand F, Joolaee M, Bahramali G. Using RFLP-PCR and direct sequencing to determine HBV genotypes in intravenous drug user patients in Tehran province [in Persian]. J Iran Med Univ. 2010; 17(71): 56-64
  • 16. Sunbul M, Leblebicioglu H. Distribution of hepatitis B virus genotypes in patients with chronic hepatitis B in Turkey. World J Gastroenterol. 2005; 11(13): 1976-80[PubMed]
  • 17. Poustchi H, Mohamadnejad M, Malekzadeh R. Hepatitis B virus infection in Iran. Iran J Clin Infect Dis. 2007; 2(1): 37-51
  • 18. Eftekhari Y, Kazemi Arababadi M, Hakimi H, Rezazadeh Zarandi E. Common HBV genotype in southeastern Iranian patients. Arch Iran Med. 2010; 13(2): 147-9[PubMed]
  • 19. Alavian SM, Fallahian F, Lankarani KB. The changing epidemiology of viral hepatitis B in Iran. J Gastrointestin Liver Dis. 2007; 16(4): 403-6[PubMed]
  • 20. Chen J, Yin J, Tan X, Zhang H, Zhang H, Chen B, et al. Improved multiplex-PCR to identify hepatitis B virus genotypes A-F and subgenotypes B1, B2, C1 and C2. J Clin Virol. 2007; 38(3): 238-43[DOI][PubMed]
  • 21. Kidd-Ljunggren K, Miyakawa Y, Kidd AH. Genetic variability in hepatitis B viruses. J Gen Virol. 2002; 83: 1267-80[DOI][PubMed]
  • 22. Fang ZL, Zhuang H, Wang XY, Ge XM, Harrison TJ. Hepatitis B virus genotypes, phylogeny and occult infection in a region with a high incidence of hepatocellular carcinoma in China. World J Gastroenterol. 2004; 10(22): 3264-8[PubMed]
  • 23. Noorali S, Hakim ST, McLean D, Kazmi SU, Bagasra O. Prevalence of Hepatitis B virus genotype D in females in Karachi, Pakistan. J Infect Dev Ctries. 2008; 2(5): 373-8[PubMed]
  • 24. Mohammadnejad L, Farajnia S, Parivar K, Naghili B, Yousefzadeh Kheirnagsh R. Hepatitis B virus genotypes in eastern Azerbaijan, Northwest Iran. Arch Iran Med. 2012; 15(7): 446-8[PubMed]
  • 25. Moradi A, Kazeminejad V, Molana AA, Bazoori M. HBV genotypes in Golestan province of Iran [in Persian]. Sci J Iran Blood Transfus Org. 2010; 7(1): 27-33
  • 26. Sharifi Z, Gharebaghian A, Noroozi M. Prevalence of hepatitis B virus genotypes to be determined by sequencing in blood donors in Kerman, Esfahan and Yazd [in Persian]. Sci J Iran Blood Transfus Organ. 2010; 6(4): 248-56
  • 27. Dokanehiifard S, Bidmeshkipour A. Study of hepatitis B virus (HBV) genotypes in Kermanshah province, West of Iran. J Biol Sci. 2009; 1(1): 113-20
  • 28. Mizokami M, Nakano T, Orito E, Tanaka Y, Sakugawa H, Mukaide M, et al. Hepatitis B virus genotype assignment using restriction fragment length polymorphism patterns. FEBS Lett. 1999; 450(1-2): 66-71[PubMed]
  • 29. Naito H, Hayashi S, Abe K. Rapid and specific genotyping system for hepatitis B virus corresponding to six major genotypes by PCR using type-specific primers. J Clin Microbiol. 2001; 39(1): 362-4[DOI][PubMed]
  • 30. Usuda S, Okamoto H, Tanaka T, Kidd-Ljunggren K, Holland PV, Miyakawa Y, et al. Differentiation of hepatitis B virus genotypes D and E by ELISA using monoclonal antibodies to epitopes on the preS2-region product. J Virol Methods. 2000; 87(1-2): 81-9[PubMed]
Creative Commons License Except where otherwise noted, this work is licensed under Creative Commons Attribution Non Commercial 4.0 International License .

Search Relations:

Author(s):

Article(s):

Create Citiation Alert
via Google Reader

Readers' Comments